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Changelog

v0.0.4

Crop and disease/pest simulation

  • SIMPLACE/Lintul5 crop growth integration (simpest.models.simplace): configuration, run orchestration, project-row and yearly sowing-day extraction, and conversion of SIMPLACE weather/crop-model/management output into the disease/fungicide simulation's input format.
  • Coupled crop growth, SEIR disease, and fungicide simulation (simpest.models.franchestyn), including four disease damage mechanisms (light stealers, RUE reducers, assimilate sappers, senescence accelerators) and optional fungicide efficacy.
  • Support for running the crop model internally (thermal-time based) or from an external daily crop-model series, with calendar-day or thermal-time (GDD) based cycle-completion.
  • Multi-start Nelder–Mead calibration (simpest.models.fr_optimizer) against reference field observations, with per-parameter calibration flags and exclusion lists.
  • The disease/fungicide simulation runner (run_franchestyn) takes in-memory pandas DataFrames for weather, management, crop-model, and reference inputs.
  • Daily simulation records and per-season summaries (AUDPC, yield loss, peak severity, weather aggregates), with CSV export helpers.

See the Usage guide and the API Reference for details, and the GitHub releases for the exact set of changes in each published version.